Tuesday, 28 July 2009

PCR amplification and error propagation

Your teacher is indeed correct.



In the first round you would get two identical molecules of the dsDNA.



In the second round you would get 3 identical molecules and one molecular with an A substituted for a G in one of the strands. ie.



No error (3 of the 4 molecules):



------G-------
------C-------


One mismatch (1 of the 4 molecules):



------A-------
------C-------


So there are a total of 8 strands of DNA after the second round and one of those strands has the mismatch. 1 / 8 = 0.125 = 12.5%



In round 3 you would have 8 dsDNA molecules and only one of those 8 dsDNA molecules would have the mismatch.

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