Wednesday 1 August 2007

cell biology - How extensive is CD47?

I don't know how extensive. Let's run a simple data query and find out: Go to GEO at NCBI. In the "Gene profiles" window, type CD47, and hit enter to launch the query. At the top of the resulting page, use the link labeled "Limits" to restrict the 7000+ results to human by entering the term "human" in the "DataSet organism" window. So, there are 3700+ results. Look through them to get an idea of which cell types and under which conditions CD47 is expressed.



Let's try a second method. Go to the BioGPS portal. Enter CD47 in the appropriate window and run the query. From the results, select the row with ID # 961 as this represents the human gene CD47. The resulting gene expression/activity chart for Hs (human) will show you in more general terms where CD47 is expressed.

No comments:

Post a Comment